Mass Spectrometry Data Engineer 80% (m/f/d)

Eawag, the Swiss Federal Institute of Aquatic Science and Technology, is an internationally networked aquatic research institute within the ETH Domain (Swiss Federal Institutes of Technology). Eawag conducts research, education and expert consulting to achieve the dual goals of meeting direct human needs for water and maintaining the function and integrity of aquatic ecosystems.
Mass Spectrometry Data Engineer 80% (m/f/d) The Department of Environmental Chemistry is offering a permanent position for a
At the Department of Environmental Chemistry, we focus on the occurrence, distribution, and fate of organic compounds in aquatic environments, aiming to develop innovative solutions for a cleaner, healthier future. Our research spans a range of compounds, from small anthropogenic pollutants to larger biomolecules like proteins and natural toxins. We operate a fleet of 20 high-end mass spectrometers for various LC/GC coupled to HRMS and IRMS applications. To remain at the forefront of environmental chemistry, we continuously expand our analytical and data processing capabilities.

We are seeking a specialist who supports scientists and technicians in our department and in Eawag’s Mass Spectrometry Facility with

• processing, evaluating, and managing mass spectrometry data from environmental samples 
• developing and maintaining data analysis workflows and lab management tools with in-house and commercial software 
• collaborating with the institution's business and scientific IT support staff 

Successful candidates should have

• degree (MSc or PhD) in analytical chemistry, environmental sciences, or equivalent 
• extensive hands-on experience in mass spectrometry data acquisition for complex samples
• proficient experience in developing data processing pipelines (e.g., non-target workflows, spectral libraries, commercial software, etc.)
• programming skills for data processing, data management, and database development and curation (e.g., R/Shiny, Python, web user interfaces, SQL) 
• know-how of IT infrastructure and its maintenance (e.g., Docker, Git, PowerShell, Linux) would be a desirable added skill 

Candidates need to be fluent in written and spoken English, while knowledge in German would be an asset. The position further requires a high level of organization, time management, teamwork, and communication skills.

Eawag is a modern employer and offers an excellent working environment where staff can contribute their strengths, experience, and ways of thinking. We promote gender equality and are committed to staff diversity and inclusion. The compatibility of career and family is of central importance to us. For more information about Eawag and our work conditions please consult www.eawag.ch and www.eawag.ch/en/aboutus/working/employment.

Applications should include a cover letter giving a description of the motivation to apply and highlighting the relevant experience and specific interests, curriculum vitae, and the names (with email addresses and phone numbers) of at least two potential references.

Deadline for applications is 30 April 2025 or until the position is filled. However, screening of applicants will begin immediately.

For further information, please contact Heinz Singer and Johannes Boog.

We look forward to receiving your application. Please send it through this webpage, as any other way of applying will not be considered. A click on the button below will take you directly to the application form.
Eawag: Swiss Federal Institute of Aquatic Science and Technology