Staff Bioinformatics Signal Processing Engineer/Scientist
US - California - San Diego - HQ, United States
Full Time Senior-level / Expert USD 152K - 228K
Illumina
Illumina sequencing and array technologies drive advances in life science research, translational and consumer genomics, and molecular diagnostics.Position Summary:
Illumina’s Primary Analysis team specializes in designing algorithms and developing software to detect genomic data from signals contained within images. Algorithmic challenges in this area include compensating for signal impairments introduced by optical, chemical, and mechanical systems. Implementation challenges include managing parallel tasks, optimizing memory accesses, and improving the speed and accuracy of genomic base calling. We develop methods to address these challenges by focusing on high reliability, speed, and completeness of results. We are seeking an exceptional individual to join our team in developing analysis solutions for use by researchers and clinicians worldwide.
Responsibilities:
- Design, prototype, and implement signal processing and bioinformatics algorithms
- Analyze data and optimize software at the algorithm, design, and/or source code level
- Collaborate with external teams to ensure a smooth, end-to-end workflow with external organizations
- Provide technical leadership and represent the team at project and executive levels
Requirements:
- Experience with signal processing, data analysis, and the application of statistical approaches
- Strong problem-solving skills
- Experience with C++ is preferred, but other languages will also be considered (Minimum: intermediate level with understanding of object-oriented design)
- Software development skills
- Personal initiative and ability to work effectively as part of a team
- Superior written and verbal communication skills
- Be curious, detail oriented, and analytical, with a proven ability to learn quickly
- Ability to define the architecture, develop, and debug software applications
- Experience with multi-threaded software, real-time systems, and/or software acceleration
Relevant Experience that Maps Well to Our Challenges:
- Experience with communications theory and information theory
- Wireless modems, digital communications, and/or RF baseband signal processing experience
- Experience with linear equalizer design and implementation
- Experience using Matlab or Matlab-like simulators for algorithm development and system simulation
- Experience with Python
- Proficient with tools for software performance analysis and optimization
- Familiarity with Agile software development processes (e.g. Scrum)
- Experience with using version control systems such as Git
Education:
- Master’s degree or PhD in bioinformatics, biology, engineering, physical sciences, computer science, mathematics, statistics, or equivalent, preferred.
Experience:
- Typically requires a minimum of 8 years of related experience with a Bachelor’s degree; or 6 years and a Master’s degree; or a PhD with 3+ years of experience; or equivalent experience
#LI-ONSITE
The estimated base salary range for the Staff Bioinformatics Signal Processing Engineer/Scientist role based in the United States of America is: $152,600 - $228,800. Should the level or location of the role change during the hiring process, the applicable base pay range may be updated accordingly. Compensation decisions are dependent on several factors including, but not limited to, an individual’s qualifications, location where the role is to be performed, internal equity, and alignment with market data. Additionally, all employees are eligible for one of our variable cash programs (bonus or commission) and eligible roles may receive equity as part of the compensation package. We offer a wide range of benefits as innovative as our work, including access to genomics sequencing, family planning, health/dental/vision, retirement benefits, and paid time off.At Illumina, we strive to foster a diverse and inclusive workplace by cultivating an environment in which everyone contributes to our mission. Built on a strong foundation, Illumina has always been rooted in openness, collaboration, and seeking alternative views and perspectives to propel innovation in genomics. We are proud to confirm a zero-net gap in pay, regardless of gender, ethnicity, or race. We also have several Employee Resource Groups (ERG) that deliver career development experiences, increase cultural awareness, and demonstrate our collective commitment to diversity and inclusion in the communities we live and work. We are proud to be an equal opportunity employer committed to providing employment opportunity regardless of sex, race, creed, color, gender, religion, marital status, domestic partner status, age, national origin or ancestry, physical or mental disability, medical condition, sexual orientation, pregnancy, military or veteran status, citizenship status, and genetic information. Illumina conducts background checks on applicants for whom a conditional offer of employment has been made. Qualified applicants with arrest or conviction records will be considered for employment in accordance with applicable local, state, and federal laws. Background check results may potentially result in the withdrawal of a conditional offer of employment. The background check process and any decisions made as a result shall be made in accordance with all applicable local, state, and federal laws. If you require accommodation to complete the application or interview process, please contact accommodations@illumina.com. To learn more, visit: https://www.dol.gov/ofccp/regs/compliance/posters/pdf/eeopost.pdf. The position will be posted until a final candidate is selected or the requisition has a sufficient number of qualified applicants.
Tags: Agile Architecture Bioinformatics Biology Computer Science Data analysis Engineering Git Mathematics Matlab PhD Python Scrum Statistics
Perks/benefits: Career development Equity / stock options Health care Salary bonus
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