Senior Director - External AI/ML Technology Search & Evaluation Engineering Lead
US: Loxo San Francisco Haskins, United States
Full Time Senior-level / Expert USD 188K - 302K
Eli Lilly and Company
Lilly is a medicine company turning science into healing to make life better for people around the world.At Lilly, we unite caring with discovery to make life better for people around the world. We are a global healthcare leader headquartered in Indianapolis, Indiana. Our employees around the world work to discover and bring life-changing medicines to those who need them, improve the understanding and management of disease, and give back to our communities through philanthropy and volunteerism. We give our best effort to our work, and we put people first. We’re looking for people who are determined to make life better for people around the world.
Position Description
The Senior Director, External AI/ML Technology Search & Evaluation Engineering Lead will serve as the externally focused technical lead responsible for identifying, evaluating, and onboarding high-impact AI/ML models, agentic systems, and datasets from the global innovation ecosystem. This role is central to shaping the Catalyze360 platform’s engagement with cutting-edge external technologies and positioning Lilly at the forefront of AI-enabled drug discovery. You will lead the technical evaluation and onboarding of external models and data assets, build benchmarking infrastructure, and establish a public-facing leaderboard to drive visibility and participation.
This role will collaborate closely with platform product, business development, legal, and data science stakeholders to ensure effective onboarding of models and data into the Catalyze360 ecosystem and lay the foundation for scalable external contributions.
Key Responsibilities
Technology Scouting and Evaluation
Lead the search for emerging AI/ML models, agentic systems, and tooling across startups, academic labs, open-source ecosystems, and vendors
Design and manage structured technical evaluations to assess external model feasibility, performance, and integration fit
Develop and maintain a landscape view of AI/ML innovations relevant to drug discovery
Data Sourcing and Technical Diligence
Identify and evaluate external datasets that can improve platform models
Lead technical assessment of data quality, structure, harmonization potential, and licensing implications
Work with legal and BD teams to align on data access terms
Benchmarking and Leaderboard Development
Design and launch a robust benchmarking capability for evaluating external model performance on defined drug discovery tasks
Establish technical standards, datasets, and metrics to support reproducible comparisons
Build and manage a public-facing leaderboard to elevate top performers and promote platform transparency
Partner Enablement and Contribution Interface
Define technical requirements and documentation guidelines for external model contributions
Work closely with contributors to ensure alignment with platform standards and ease of onboarding
Support external-facing events, technical briefings, and hackathons to engage the broader AI/ML community
Cross-Functional Integration
Collaborate with internal product and technical teams to coordinate handoff of models and data post-evaluation
Partner with Internal Tech @Lilly leads to integrate with federated learning infrastructure
Functional and Technical Expertise
Expertise in AI/ML modeling, evaluation frameworks, and architecture trends, particularly for biomedical or multi-modal data
Experience conducting technical diligence on external models, tools, and datasets
Familiarity with public benchmarks, shared tasks, and leaderboard design
Working knowledge of data licensing, privacy, and usage considerations
Ability to assess external innovation in the context of platform performance and roadmap alignment
Influence and Leadership
Strategic orientation with the ability to prioritize high-value opportunities in a rapidly evolving ecosystem
Strong communication skills to engage external innovators and translate findings for internal stakeholders
Comfortable interfacing with startups, academic labs, and technical leadership at peer companies
Skilled at representing Lilly’s technical platform priorities in public and private forums
Basic Qualifications
PhD, MS, or equivalent in computer science, AI/ML, data science, computational biology, or a related field
5+ years of experience (PhD) or 5+ years of experience (BS/MS) in AI/ML research, platform strategy, or technical product evaluation
Additional Preferences
Prior experience in biotech, pharma, AI startups, or applied ML environments
Experience designing or contributing to public model evaluation initiatives or benchmarks
Lilly is dedicated to helping individuals with disabilities to actively engage in the workforce, ensuring equal opportunities when vying for positions. If you require accommodation to submit a resume for a position at Lilly, please complete the accommodation request form (https://careers.lilly.com/us/en/workplace-accommodation) for further assistance. Please note this is for individuals to request an accommodation as part of the application process and any other correspondence will not receive a response.
Lilly is proud to be an EEO Employer and does not discriminate on the basis of age, race, color, religion, gender identity, sex, gender expression, sexual orientation, genetic information, ancestry, national origin, protected veteran status, disability, or any other legally protected status.
Our employee resource groups (ERGs) offer strong support networks for their members and are open to all employees. Our current groups include: Africa, Middle East, Central Asia Network, Black Employees at Lilly, Chinese Culture Network, Japanese International Leadership Network (JILN), Lilly India Network, Organization of Latinx at Lilly (OLA), PRIDE (LGBTQ+ Allies), Veterans Leadership Network (VLN), Women’s Initiative for Leading at Lilly (WILL), enAble (for people with disabilities). Learn more about all of our groups.
Actual compensation will depend on a candidate’s education, experience, skills, and geographic location. The anticipated wage for this position is
$188,250 - $302,500Full-time equivalent employees also will be eligible for a company bonus (depending, in part, on company and individual performance). In addition, Lilly offers a comprehensive benefit program to eligible employees, including eligibility to participate in a company-sponsored 401(k); pension; vacation benefits; eligibility for medical, dental, vision and prescription drug benefits; flexible benefits (e.g., healthcare and/or dependent day care flexible spending accounts); life insurance and death benefits; certain time off and leave of absence benefits; and well-being benefits (e.g., employee assistance program, fitness benefits, and employee clubs and activities).Lilly reserves the right to amend, modify, or terminate its compensation and benefit programs in its sole discretion and Lilly’s compensation practices and guidelines will apply regarding the details of any promotion or transfer of Lilly employees.
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Tags: Architecture Biology Computer Science Data quality Drug discovery Engineering Machine Learning ML models Open Source Pharma PhD Privacy Research
Perks/benefits: Career development Flex hours Flex vacation Health care Insurance Medical leave Salary bonus Team events
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