Principal Prediction & Insights Applications Engineer, Small & Large-Molecule Discovery

San Diego Campus Point - CA, United States

Bristol Myers Squibb

Bristol Myers Squibb is a global biopharmaceutical company committed to discovering, developing and delivering innovative medicines to patients with serious diseases.

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Working with Us
Challenging. Meaningful. Life-changing. Those aren’t words that are usually associated with a job. But working at Bristol Myers Squibb is anything but usual. Here, uniquely interesting work happens every day, in every department. From optimizing a production line to the latest breakthroughs in cell therapy, this is work that transforms the lives of patients, and the careers of those who do it. You’ll get the chance to grow and thrive through opportunities uncommon in scale and scope, alongside high-achieving teams. Take your career farther than you thought possible.

Bristol Myers Squibb recognizes the importance of balance and flexibility in our work environment. We offer a wide variety of competitive benefits, services and programs that provide our employees with the resources to pursue their goals, both at work and in their personal lives. Read more: careers.bms.com/working-with-us.

Summary:

Own the strategy and delivery of GenAI-native applications, predictive-model workflows, and insight-driven analytics platforms that accelerate large and small-molecule invention. Translate scientific objectives into intuitive software products and robust model-ops practices that help chemists, protein engineers, and data scientists iterate faster, uncover deeper insights, and make better decisions. 

 

Molecular Discovery ML Enablement: 

  • Champion predictive-model use-cases across small and large molecule discovery (e.g., property prediction, sequence optimization, generative design).

  • Design and build platforms that orchestrate cutting-edge structure- and sequence-prediction toolkits (RDKit, OpenEye, Schrödinger LiveDesign, AlphaFold) for CADD, sequence design and developability assessment.

  • Track, evaluate, and train latest molecular prediction & design models/tools from literature and open-source community. 

 

AI-Driven Scientific Applications: 

  • Using agentic GenAI frameworks, build scientifically grounded conversational analytics, automated reports, and “copilot” workflows that guide scientists through complex SAR, sequence datasets and tools.

  • Deliver full-stack applications, React/Next.js fronts with Python/FastAPI & GraphQL services - that surface models and analytics at scale. 

 

Model-Ops & Engineering Excellence: 

  • Stand up automated pipelines for data curation, experiment tracking, CI/CD, and governed model release (PyTorch/TensorFlow + MLflow/Kubeflow/SageMaker + GitHub Actions).

  • Package and deploy predictive applications and model endpoints to cloud-native MLOps or on-prem containers for scalable inference and performant access.

  • Codify reusable templates, inner-source libraries, and design systems that cut feature time-to-value by 40%. 

 

Leadership & Collaboration:

  • Mentor a cross-disciplinary team of full-stack and ML engineers; foster “better-than-best” practices in code quality, documentation, and UX research.

  • Partner with discovery leads, IT operations, and external vendors to align technical backlogs with portfolio milestones and data-quality standards.

  • Influence budgeting and make-vs-buy decisions for AI tooling and platform enhancements. 

 

Qualifications: 

  • Deep Discovery & Molecular Tooling Context –7+ years with relevant advanced degree building/supporting platforms and tools, for computational compound design and protein engineering workflows (Schrodinger, OpenEye, MOE, MiXCR, Alphafold); fluent in SAR analysis, sequence/structure predictions, and assay lifecycles.

  • GenAI engineering depth – Demonstrated success building GenAI Applications and agentic workflows; fine-tuning and deploying LLMs, diffusion models, structure-prediction models (AlphaFold family, RoseTTAFold), or vision transformers for scientific or operational use-cases.

  • Modern MLOps – IaC (Terraform/CloudFormation), automated testing, secrets management, continuous model evaluation, lineage tracking.

  • Influence & communication – lead architecture reviews, map tech choices to scientific KPIs, mentor cross-functional teams, and guide roadmap workshops with executives and bench scientists alike. 

 

Preferred Skills:

  • Contributions to open-source molecular-design projects. 

  • Advanced Python & React; shipped production apps that integrate APIs, scale model inference, and manage complex research datasets.

  • Comfortable packaging and operating applications/models on Kubernetes/EKS, serverless FaaS, or on-prem containers. 

  • Knowledge of GPU runtime tuning or Triton-based multi-model serving.

  • Experience crafting cookie-cutter templates or inner-source libraries that accelerate team velocity.

  • Cloud-architect certifications (AWS Pro, Azure Expert, etc.).

  • Multi-cloud deployment mastery (AWS, Azure, GCP). 

Education / Credentials – M.S. or Ph.D. in Computer Science, Machine Learning, Computational Chemistry/Biology, or related field; Cloud-architect certification a plus. 

Join Us: Empower researchers with the AI tools, agentic workflows, and insight-driven applications they need to invent the next generation of therapeutics - faster, smarter, and at scale. 

The starting compensation for this job is a range from $155,000 - $170,000, plus incentive cash and stock opportunities (based on eligibility).

The starting pay rate takes into account characteristics of the job, such as required skills and where the job is performed. 

Final, individual compensation will be decided based on demonstrated experience. 

Eligibility for specific benefits listed on our careers site may vary based on the job and location. For more on benefits, please visit https://careers.bms.com/life-at-bms/.

Benefit offerings are subject to the terms and conditions of the applicable plans then in effect and may include the following: Medical, pharmacy, dental and vision care. Wellbeing support such as the BMS Living Life Better program and employee assistance programs (EAP). Financial well-being resources and a 401(K). Financial protection benefits such as short- and long-term disability, life insurance, supplemental health insurance, business travel protection and survivor support. Work-life programs include paid national holidays and optional holidays, Global Shutdown Days between Christmas and New Year’s holiday, up to 120 hours of paid vacation, up to two (2) paid days to volunteer, sick time off, and summer hours flexibility. Parental, caregiver, bereavement, and military leave. Family care services such as adoption and surrogacy reimbursement, fertility/infertility benefits, support for traveling mothers, and child, elder and pet care resources. Other perks like tuition reimbursement and a recognition program.

If you come across a role that intrigues you but doesn’t perfectly line up with your resume, we encourage you to apply anyway. You could be one step away from work that will transform your life and career.

Uniquely Interesting Work, Life-changing Careers
With a single vision as inspiring as “Transforming patients’ lives through scienceℱ ”, every BMS employee plays an integral role in work that goes far beyond ordinary. Each of us is empowered to apply our individual talents and unique perspectives in a supportive culture, promoting global participation in clinical trials, while our shared values of passion, innovation, urgency, accountability, inclusion and integrity bring out the highest potential of each of our colleagues.

On-site Protocol

BMS has an occupancy structure that determines where an employee is required to conduct their work. This structure includes site-essential, site-by-design, field-based and remote-by-design jobs. The occupancy type that you are assigned is determined by the nature and responsibilities of your role:

Site-essential roles require 100% of shifts onsite at your assigned facility. Site-by-design roles may be eligible for a hybrid work model with at least 50% onsite at your assigned facility. For these roles, onsite presence is considered an essential job function and is critical to collaboration, innovation, productivity, and a positive Company culture. For field-based and remote-by-design roles the ability to physically travel to visit customers, patients or business partners and to attend meetings on behalf of BMS as directed is an essential job function.

BMS is dedicated to ensuring that people with disabilities can excel through a transparent recruitment process, reasonable workplace accommodations/adjustments and ongoing support in their roles. Applicants can request a reasonable workplace accommodation/adjustment prior to accepting a job offer. If you require reasonable accommodations/adjustments in completing this application, or in any part of the recruitment process, direct your inquiries to adastaffingsupport@bms.com. Visit careers.bms.com/eeo-accessibility to access our complete Equal Employment Opportunity statement.

BMS cares about your well-being and the well-being of our staff, customers, patients, and communities. As a result, the Company strongly recommends that all employees be fully vaccinated for Covid-19 and keep up to date with Covid-19 boosters.

BMS will consider for employment qualified applicants with arrest and conviction records, pursuant to applicable laws in your area.

If you live in or expect to work from Los Angeles County if hired for this position, please visit this page for important additional information: https://careers.bms.com/california-residents/

Any data processed in connection with role applications will be treated in accordance with applicable data privacy policies and regulations.

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Category: Engineering Jobs

Tags: APIs Architecture AWS Azure Biology Chemistry CI/CD CloudFormation Computer Science Copilot Diffusion models Engineering Excel FastAPI GCP Generative AI GitHub GPU GraphQL KPIs Kubeflow Kubernetes LLMs Machine Learning MLFlow MLOps Model inference Open Source Pipelines Privacy Protein engineering Python PyTorch RDKit React Research SageMaker TensorFlow Terraform Testing Transformers UX UX Research

Perks/benefits: Career development Competitive pay Equity / stock options Fertility benefits Health care Insurance Medical leave Parental leave

Region: North America
Country: United States

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