Bioinformatician II- Tisch Cancer Institute BiNGS Core
Tasks
- Build HTML reports
- Create data visualizations for presentations
- Create datasets for publications
- Execute bulk ATAC-seq analysis
- Execute bulk RNA-seq analysis
- Execute single cell ATAC-seq analysis
- Execute single cell RNA-seq analysis
- Execute single cell multiome analysis
- Implement new bioinformatics tools
- Integrate multi-omics datasets
- Integrate public genomics datasets
- Lead transcriptomics and epigenetics data analysis projects
- Manage NGS data on HPC
- Manage NGS storage and archiving
- Perform gene expression signature correlation analysis
- Perform histone PTM enrichment analysis
- Provide computational training to investigators
Perks/Benefits
- N/A
Skills/Tech-stack
ATAC-seq | AWS | Amazon Web Services | Bash | Bioconductor | Bioinformatics | Bowtie2 | C++ | Cell Ranger | ChIP-seq | ChromVAR | Cicero | Cut&Run | ENCODE | FIBER-seq | Genome browser | HPC | HTML | Hadoop | Hi-C | Linux | MACS2 | MATLAB | MoFA | Perl | Python | R | RNA-seq | RStudio | SNF | STAR | Samtools | Scenicplus | Seurat | Signac | Single cell multiome | Single-cell | Single-cell ATAC-seq | Single-cell RNA-seq | Spatial transcriptomics | TCGA | UCSC Genome Browser | WES | WGS | Web Services
Education
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