Intern, Translational Data Science (Project: Characterizing Immune States in PDAC and Their Impact on Disease Progression)

Tasks

• Characterize subtypes using immune signatures and pathway analyses
• Compare results with TCGA and DepMap
• Correct batch effects across datasets
• Document analysis workflows and present findings
• Evaluate associations with early progression
• Identify immune subtypes using clustering and dimensionality reduction
• Map PDAC molecular subtypes and compare with immune subtypes
• Map subtypes to clinical outcome data
• Process and harmonize transcriptomic datasets
• Visualize results and generate translational summaries

Perks/Benefits

• N/A

Skills/Tech-stack

Batch Effect Correction | Clustering | DepMap | Dimensionality Reduction | Machine Learning | Python | R | Statistical Methods | TCGA | Transcriptomics