Lead Bioinformatics Scientist - Sample to Answer
USA - CA - San Diego - 3595 John Hopkins Court, United States
R
USD 120K-150K Senior-level Full Time
Tasks
- Analyze genomic datasets
- Analyze proteomic datasets
- Analyze transcriptomic datasets
- Architect Nextflow pipelines
- Benchmark against GIAB
- Build decision trees
- Build statistical classifiers
- Conduct concordance analysis
- Define clinical reporting boundaries
- Design and optimize bioinformatics pipelines
- Develop computational approaches
- Develop predictive models
- Drive pipeline accuracy improvements
- Drive pipeline cost reduction
- Drive pipeline turnaround time improvements
- Establish Quality Control metrics
- Generate and test hypotheses
- Lead proof of concept for sequencer transitions
- Perform exploratory data analysis
- Perform genome annotation strategy
- Perform variant calling
- Provide results interpretation guidance
- Recommend cost benefit improvements
- Set QC thresholds
- Support reporting standards for clinical stakeholders
Perks/Benefits
Skills/Tech-stack
Allele Dropout | AnnotSV | Artificial Intelligence | BLAST | Bioinformatics | Bowtie | Cloud | Concordance Analysis | Confidence Intervals | DNA Sequencing | Data Analysis | Data Integrity | Data Mining | Data Modeling | Decision Trees | Deep learning | Exploratory Data Analysis | Flanking-Read Ratios | GATK | GIAB | Genome annotation | Genomics | High Performance | High-Performance Computing | Java | Linux | Machine Learning | NGS Pipelines | Nextflow | Nirvana | Performance Computing | Perl | Predictive Modeling | Proteomics | Python | Quality Control | Quality metrics | R | Read Support | Single Gene Noninvasive Fetal Screening | Statistical classification | Statistics | Transcriptomics | Unix | Variant calling
Education
Regions
Countries
States
Cities
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