Bioinformatics Engineer
Tasks
- Architect scalable Google Cloud solutions
- Collaborate with scientists and engineers to integrate pipelines
- Develop extend maintain Nextflow workflows
- Evaluate bioinformatics pipelines
- Implement workflow versioning, containerization, testing, documentation
- Optimize pipeline input output
- Prepare outputs for visualization and analysis
- Stay current with sequencing technologies and analytical methods
Perks/Benefits
- 401k match
- Dependent care assistance
- Educational benefits
- Employee referral bonus
- Flexible spending account
- Medical, dental & vision coverage
- Paid Holidays
- Paid time off
- Parking reimbursement
- Transportation reimbursement
Skills/Tech-stack
BAM | BED | BWA | Batch | Bismark | Bulk RNA-seq | CI/CD | Cell Ranger | Cloud Storage | Cloud platform | Compute Engine | Containerization | DNA variant calling | Docker | FASTQ | GATK | Git | Google Cloud | Google Cloud Platform | Life Sciences | Life Sciences API | Methylation analysis | Nextflow | Nextflow DSL2 | Python | R | RNA-seq | STAR | Salmon | Scanpy | Seurat | Single-cell | Single-cell RNA-seq | Singularity | VCF | Variant calling | Workflow versioning
Education
Roles
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