Research Associate - Computational Immunology
Los Angeles, CA - Health Sciences Campus, United States
USD 71K-89K Mid-level Full Time
Tasks
- Analyze bulk RNA seq and single cell RNA seq data
- Build analysis ready databases and metadata frameworks
- Collaborate with experimental and clinical investigators
- Create reproducible modular pipelines
- Design scalable analysis pipelines
- Develop computational tools for immunogenomics
- Document governance and ensure data integrity
- Infer cell composition and deconvolution
- Integrate multi-omics datasets
- Optimize workflows for HPC and cloud
- Perform quality control normalization and batch correction
- Prepare reproducible notebooks figures and reports
- Present methods to multidisciplinary audiences
- Publish results in manuscripts and grant proposals
- Run differential analysis and pathway enrichment
- Track clonotypes and compute diversity metrics
Perks/Benefits
- N/A
Skills/Tech-stack
ATAC sequencing | BCR Sequencing | Batch Effect Correction | Clonotype Analysis | Clonotype tracking | Cloud Computing | Database Design | Deconvolution | Differential expression | Diversity Metrics | Docker | Fair Principles | HPC | Linux | Metadata Management | Multi-Omics | Multi-Omics Integration | Normalization | Omics integration | Pathway Enrichment | Python | Quality Control | R | RNA Sequencing | RNA-seq | Single cell ATAC sequencing | Single-cell | Single-cell RNA-sequencing | Singularity | Slurm | Statistical modeling | TCR sequencing
Education
Regions
Countries
States
Cities
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